HMMBUILD (HMMER PROFILE HMM)

[Abstract] [NPS@ help] [Original server]

Paste a multiple protein alignment in clustalw format below : help

Alignment boundaries :
If new alignment boundaries, keep sequences with at least residues in alignment region.

Profile HMM construction options :
Alignment mode :
Weighting mode :
If blosum weighting mode, you can choose percent identity (--idlevel, fraction from 0 to 1):


User : public@54.87.119.171. Last modification time : Thu Jan 14 21:53:49 2016. Current time : Sat Dec 3 20:38:08 2016