[Abstract] [NPS@ help] [Original server]
Program: blastp : protein sequence versus protein sequence databank blastx : nucleic sequence (6 frames) versus protein sequence databank
Database : Non-redundant protein sequences (UniProtKB 60 %identity maximum + PDB sequences) Protein Data Bank (PDB) sequences Maximum 95% identity Protein Data Bank (PDB) sequences Maximum 25% identity Protein Data Bank (PDB) sequences Swiss-Prot (UniProtKB/Swiss-Prot) UniProt Knowledge Base (Swiss-Prot + TrEMBL)
Sequence name (optional) : Paste a protein/nucleic sequence below : help
BLAST parameters: Filter query sequence (-F) : TrueFalse(DUST with BLASTN, SEG with others) Expectation value (-e, real) : 1e-061e-031.010.0100.0 Number of on-line description (-v, int) : 50010002000 Number of alignments to show (-b, int) : 50010002000 Matrix (-M) : BLOSUM45BLOSUM62BLOSUM80 PAM30PAM70