• PRABI-GERLAND
  RHONE-ALPES BIOINFORMATIC POLE GERLAND SITE
• Institute of Biology and Protein Chemistry

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When you see in NPS@ the sentence "Paste your sequence below", you must paste a sequence as indicated below.

SEQUENCES :

• Proteins :

  MKKITIYDLAELSGVSASAVSAILNGNWKKRRISAKLAEKVTRIAEEQGYAINRQASMLR
  SKKSHVIGMIIPKYDNRYFGSIAERFEEMARERGLLPIITCTRRRPELEIEAVKAMLSWQ
  VDWVVATGATNPDKISALCQQAGVPTVNLDLPGSLSPSVISDNYGGAKALTHKILANSAR
  RRGELAPLTFIGGRRATITPASVYAASTMRIASWGLACRRRIFWLPAIRKATLRTACRSG
  LAARRRCCRGYLLTRRYPWKGLCAGCRRWV
  

• Nucleic acids :

  GTCGACCTGCAGGGCGAAGGCGTTTTCGCCAAGTTCGGCGACCAGTTTGTTGAGCTTTTC
  GCCTTCGCGGTCGATCAGTACCACTTTTGCGCCAGCCCCAAGCAGGGTCCTCGCGCACTC
  GAGGCCGATACCGGACGCCGCGCCGGTGATCGCGGCGACTTTACCGCTGAGGGAAGTATT
  CATAGAGGAGACAGAGTGCTTCATTTTATAATCCTTTGCCGTGTCTGGTTAAAACTATCG
  AACGCGAGGGCATCACGTTCGAGGTGATAGACTAAAACTGGTAACATATTGAATATCAGC
  ATCTTAATTCAGGCTTGCTGGCATGTTGAGGCGGTATGCGCGCGTACTTCCTGGCGTGGA
  AAGGATGCTCAATCGATGAAGCTATGTTGCTCTCGCTTCATCGATTGAGCAAGTGGGGAA
  ATTAACAGCGACATGATTTTGTGACGCAAGTTGGAAAAATGAAGAAGATAACGATTTACG
  ACCTGGCGGAACTTTCCGGCGTTTCGGCGAGCGCGGTGAGCGCTATCCTCAACGGTAACT
  GGAAAAAGCGCCGCATCAGCGCCAAGCTTGCGGAAAAGGTGACGCGGATTGCCGAGGAGC
  AGGGCTATGCGATTAACCGTCAGGCCAGCATGCTGCGCAGTAAAAAATCACACGTCATCG
  GTATGATTATCCCCAAATATGATAACCGCTACTTCGGTTCCATCGCCGAACGCTTTGAGG
  AGATGGCCCGCGAGCGCGGCCTGCTGCCGATTATCACCTGTACGCGCCGGCGTCCGGAAC
  TGGAGATCGAAGCGGTAAAGGCGATGCTCTCCTGGCAGGTTGACTGGGTGGTCGCGACCG
  GGGCGACCAATCCGGATAAAATTTCCGCGCTATGCCAGCAGGCGGGCGTGCCAACGGTCA
  ATCTCGACCTGCCGGGCTCTCTCTCGCCGTCGGTGATTTCGGATAACTACGGCGGCGCGA
  AAGCGTTGACTCATAAGATCCTGGCTAATAGCGCCCGCCGCCGCGGAGAGCTGGCGCCGC
  TGACCTTTATCGGCGGGCGCAGAGCGACCATAACACCAGCGAGCGTTTACGCGGCTTCCA
  CGATGCGCATCGCGAGCTGGGGCTTAGCGTGCCGCAGGCGAATATTCTGGCTCCCGGCTA
  TTCGAAAGGCCACGTTGAGGACTGCCTGCAGGAGCGGTTTGGCAGCGAGAAGACGCTGTT
  GCAGGGGATATTTGTTAACTCGACGATATCCCTGGAAGGGGTTGTGCGCTGGCTGTCGCA
  GGTGGGTCTGACCGGCAGCGAGCAGCCGCCGATGGGCTGCTTCGACTGGGATCCTTTTGT
  CTACCTGCTGGGGCACGATATCGACATGGTGCAGCAGGACG
  

ALLOWED CHARACTERS :

• Proteins : ABCDEFGHIKLMNPQRSTUVWXYZ
  Warning: B,U,Z are substituted in X because some softwares don't understand them.
• Nucleic acids : ABCDGHKMNRSTUVWY

CODES :

• Proteins :

     A   alanine               B   aspartate or asparagine
     C   cystine               D   aspartate
     E   glutamate             F   phenylalanine
     G   glycine               H   histidine
     I   isoleucine            K   lysine
     L   leucine               M   methionine
     N   asparagine            P   proline
     Q   glutamine             R   arginine
     S   serine                T   threonine	
     U   selenocysteine        V   valine
     W   tryptophan            X   any
     Y   tyrosine              Z   glutamate or glutamine
  

• Nucleic acids :

     A   adenosine             B   G T C
     C   cytidine              D   G A T
     G   guanine               H   A C T
     K   G T (keto)            M   A C (amino)
     N   A G C T (any)         R   G A (purine)
     S   G C (strong)          T   thymidine
     U   uridine               V   G C A
     W   A T (weak)            Y   T C (pyrimidine)
  

SEQUENCE IDENTIFIERS :
The sequence identifiers must have at least six characters.
The allowed characters are : ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz_0123456789