SIMPA96 help
A brief introduction to SIMPA96
SIMPA96 is a nearest neighbor secondary structure prediction method. It's based on the homologue method described by
Levin et al.
Availability in NPS@
This method is available :
Parameters
No parameter required
NPS@ SIMPA96 output example
You can see:
MPSA /ANTHEPROT link to
view the prediction in these local protein sequence analysis
softwares.
The color coded prediction (a sequence line and below the corresponding predicted states).
The sequence length .
The percentage of each secondary element .
Two graphics . The first to better visualize the prediction. In the second, there are the reliability scores for each
predicted state.
The paramaters used .
Link on the prediction result text file .
References
User : public@3.235.11.178. Last modification time : Thu Jan 14 18:54:00 2016. Current time : Thu Feb 25 23:27:57 2021