A brief introduction to PREDATOR
PREDATOR is a secondary structure prediction method based on recognition of potentially hydrogen-bonded residues in a single
amino acid sequence ( original server).
Availability in NPS@
This method is available :
The user can choose between two database files stride.dat and dssp.dat. These files contain propensity tables, secondary structural
assignments and thresholds for two secondary structure assignment methods from tertiary structure : STRIDE and DSSP.
NPS@ PREDATOR output example
You can see:
MPSA/ ANTHEPROT view the prediction in these local protein sequence analysis
color coded prediction (a sequence line and below the corresponding predicted states). The
sequence length. The
percentage of each secondary element.
Two graphics. The first to better visualize the prediction. In the second, there are the reliability scores for each
The paramaters used. Link on the
prediction result text file.
User : firstname.lastname@example.org. Last modification time : Thu Jan 14 18:51:38 2016. Current time : Wed Aug 5 18:41:20 2020