[Abstract] [NPS@ help] [Original server]
Paste a multiple protein alignment in clustalw format below : help
Weighting parameters (method of Sibbald and Argos) : Gap excision threshold (-X, fraction) :
Profile construction options : Alignment boundaries : If new alignment boundaries, keep sequences with at least residues in alignment region. Score matrix : BLOSUM 30 BLOSUM 45BLOSUM 50BLOSUM 62BLOSUM 65BLOSUM 80BLOSUM 100PAM 30PAM 40PAM 120PAM 160PAM 200PAM 220PAM 250PAM 400GONNET Alignment mode : Global Semi GlobalDomain GlobalLocal Block profile mode (-b) :