If you use this service, could you please send us a mail to npsang@ibcp.fr with details about your usage of the NPSA service (tools used, frequency, type of sequence, ..) ? Could you explain what makes this service unique for you ? Could you please add information about your country and your laboratory ? Thanks

HMMBUILD (HMMER PROFILE HMM)

[Abstract] [NPS@ help] [Original server]

Paste a multiple protein alignment in clustalw format below : help

Alignment boundaries :
If new alignment boundaries, keep sequences with at least residues in alignment region.

Profile HMM construction options :
Alignment mode :
Weighting mode :
If blosum weighting mode, you can choose percent identity (--idlevel, fraction from 0 to 1):


User : public Last modification time : Mon Mar 15 15:24:33 2021. Current time : Sat Oct 12 21:50:42 2024