Paste a protein sequence below : help

Tuning of the prediction :
SVM efficiency: help [1] High Specificity | Low  Sensitivity | Training Set = 30 monotopic proteins [2] Low  Specificity | High Sensitivity | Training Set = 30 monotopic proteins [3] High Specificity | Low  Sensitivity | Training Set = 30 monotopic + 8 transmembrane proteins [4] Low  Specificity | High Sensitivity | Training Set = 30 monotopic + 8 transmembrane proteins

Smoothing of the prediction :

• Use prediction smoothing :
  • window size : 3 5 7 9 11 13 15
  • smoothing factor : (floating number > 0.0)

Output width: 10 20 30 40 50 60 70 80 90 100 All in 1 line

Prediction analysis : help

• Hydrophobic moment μ_H computation:
  • window size = 7 9 11 13 15 17 19
  • periodicity = (range 0 to 180 deg)
• Show predicted secondary structure: