FIT help

A brief introduction to FIT
FIT is a program devoted to the 3D structure superimposition of molecules after sequence alignment. The basic algorithm for fitting molecules was kindly provided by P. Koehl in Strasbourg. The program has been extented by C. Geourjon in order to allow amino acid selection. The perl interface was written by F. David. The FIT program is currently limited to the superimposition of up to 25 chains.

The logical flow chart is as follows :

Availability in NPS@
This program is available :

CLUSTALW parameters are not currently available for the user.

NPS@ FIT output example 1cdo:3bto
The NPS@ FIT output is divided into 4 successive pages